PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011075324.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Pedaliaceae; Sesamum
Family GeBP
Protein Properties Length: 219aa    MW: 25002.3 Da    PI: 10.17
Description GeBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011075324.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF57377.22.7e-2477169397
          DUF573   3 fqrlwseeDeivlLqGlidfkaktgkspsddidafyefvkksisfkvsksqlveKirrLKkKfkkkvkk.aksgkepsfskehdqkifelskkiW 96 
                     f++++seeDei+lL+Gl  f a+      + +++fy+f+k+s+  +++++q++eKirrLK Kf+++ ++ +++g   +fs +h++ +fe+sk +W
  XP_011075324.1  77 FSKIFSEEDEISLLKGLAIFWADGR---NNKWTEFYNFIKDSLPHQFTRTQVSEKIRRLKGKFENNFERaRANGGCLDFSDAHESAVFEVSKTLW 168
                     899*****************77755...469***********************************9997889999******************* PP

          DUF573  97 g 97 
                     g
  XP_011075324.1 169 G 169
                     8 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF045045.5E-2377169IPR007592Protein of unknown function DUF573
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    Send to blast
FKLGLLRGHR CCASISNKPV PRKDESECTA ALPPKKPKLN LPREEEVPKD ESECSSSSAS  60
NFIIAPAAKP SEKNTPFSKI FSEEDEISLL KGLAIFWADG RNNKWTEFYN FIKDSLPHQF  120
TRTQVSEKIR RLKGKFENNF ERARANGGCL DFSDAHESAV FEVSKTLWGE DENEAGDKHA  180
EKEKETRDRS RSQKKRKRAG KDPKRREKGL GKSMMQKKR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011075324.11e-160PREDICTED: mediator-associated protein 1-like, partial
TrEMBLS8C6P66e-29S8C6P6_9LAMI; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA13664413
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G11510.14e-13DNA-binding storekeeper protein-related transcriptional regulator